How to save a Pandas DataFrame in HDF5 format

7-Day Challenge

Land Your First Data Science Job

A proven roadmap to prepare for $75K+ entry-level data roles. Perfect for Data Scientist ready to level up their career.

Build portfolios that hiring managers love
Master the Python and SQL essentials to be industry-ready
Practice with real interview questions from tech companies
Access to the $100k/y Data Scientist Cheatsheet

Join thousands of developers who transformed their careers through our challenge. Unsubscribe anytime.

Sometimes, you will need to save a DataFrame in HDF5 format, either to share it or store it.

Here is how to save a DataFrame in HDF5 format.

# Import the Pandas library
import pandas as pd

# We create our example dataframe
df = pd.DataFrame({"col1" : range(0,10)})

# We save the dataframe as hdf5
df.to_hdf('my_df.h5', key='df', mode='w')
How to save a DataFrame in HDF5 format

A few options are utilized here,  the key and the mode, the key represents an identifier you are passing to the file when it is stored. (e.g. here "df" )

The mode is here to specify what Python should do with the file. A bit like the open() method when you deal with a text file. (e.g. here "w" because we are writing the file)

Here you are! You now know how to save a DataFrame in HDF5 format!

More on DataFrames

If you want to know more about DataFrame and Pandas. Check out the other articles I wrote on the topic, just here :

Pandas - The Python You Need
We gathered the only Python essentials that you will probably ever need.
7-Day Challenge

Land Your First Data Science Job

A proven roadmap to prepare for $75K+ entry-level data roles. Perfect for Data Scientist ready to level up their career.

Build portfolios that hiring managers love
Master the Python and SQL essentials to be industry-ready
Practice with real interview questions from tech companies
Access to the $100k/y Data Scientist Cheatsheet

Join thousands of developers who transformed their careers through our challenge. Unsubscribe anytime.

Free Newsletter

Master Data Science in Days, Not Months 🚀

Skip the theoretical rabbit holes. Get practical data science skills delivered in bite-sized lessons – Approach used by real data scientist. Not bookworms. 📚

Weekly simple and practical lessons
Access to ready to use code examples
Skip the math, focus on results
Learn while drinking your coffee

By subscribing, you agree to receive our newsletter. You can unsubscribe at any time.